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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889727.1_cds_XP_016444406.1_39471
CDS Infomation

[gene=LOC107769685] [db_xref=GeneID:107769685] [protein=indole-3-glycerol phosphate synthase, chloroplastic-like] [protein_id=XP_016444406.1] [location=complement(join(30950..31030,32295..32363,32459..32541,32922..33000,33411..33575,33651..33695,33968..34042,36031..36207,36308..36556,38900..39088))] [gbkey=CDS]
Sequence

ATGGAAGCTGTAGTGCCATTGAGAACCACCTTTACCGCGACGGCAACTGCAGCGTCGACG
GCAAGACCTAGGCTATCATTCCAACCCCTTGCCAAGAATTTCGCATTCTCCAGGTTAATT
CCAGCCGGAATTTCCATGACTGATCGAGCTCGCTCTTCGCTGCAATGTCCCCCCGTTCGA
GTTCAACAGGATGGATCTGCGGTGGTTTCTGAAGACACCATTTCTGAAGAAGATGCTCTC
AAAATAAAGGAGTGGGAAGTGGAGAGGTTGCAAGATGAAATAGCTGCAAGTCAGGGTATA
AGAATTAGGAGGAGGCCACCAACAAGACCTCCTTTGCACTATGTTGGCCCTTTTGAATTT
CAAGTGGAGAATGAAGGCAATACTCCATGCAATATTCTAGAAGAAATTATATGGTACAAA
GACAAGGAAGTTTTGCAGATGAAAGAGAGGACACCTCTTTCCGCGTTGAAGAAAGCTATT
AGCAGTGCTCCACCTACTAGAGATTTTCTAGGAGCTCTCAGAAGATCATATTCGAGAACT
GGATTGCCTGGTCTTATTGCTGAAGTGAAGAAGGCTTCTCCAAGTAGAGGACTTCTTCGA
GAAGATTTTAATCCTGTAAAGATTGCCAAAGCTTATGAAAAAGGTGGGGCAGCGTGCCTT
AGTGTTTTGACAGACGAGAAGTATTTTCAGGGAAGCTTTGAGAATCTCGAGGCCATAAGA
AATGCTGGAGTAGAGTGTCCTTTGCTGTGTAAAGAATTTGTTGTAGATGCTTGGCAAATC
TACTATGCTCGTATTAAAGGTGCCGATGCAATTCTTTTAATTGCTGCTGTTCTACCAGAT
ATTGACATCATGTATATGACTAAGATCTGCAAATTACTTGGATTGACGGCGCTAGTTGAG
GTGCATGATGAGAGGGAAATGGATCGCGTCCTCGGAATTGATGGGATTGAGCTTATTGGC
ATCAATAATCGAGATCTTGGAACATTCAAGGTGGACATTAGCAATACCAAAAACCTTCTT
GAAGGAGAACGTGGGAAAAGGATCCATGAGGAGGGCATAATTGTGGTTGGGGAGTCTGGA
CTCTTTACACCTGCTGATGTTGCTTATGTACAAGAAGCTGGTGTTAAAGCAGTGCTAGTT
GGAGAGTCGCTTGTAAAACAGATGGATCCTGCTAAAGGAATAAGTGAACTCTTTGGTAAA
GATATTTCTTGA

Peptide Sequence

PEP ID

XP_016444406.1
PEP Infomation

PREDICTED: indole-3-glycerol phosphate synthase, chloroplastic-like [Nicotiana tabacum]
Sequence

MEAVVPLRTTFTATATAASTARPRLSFQPLAKNFAFSRLIPAGISMTDRARSSLQCPPVR
VQQDGSAVVSEDTISEEDALKIKEWEVERLQDEIAASQGIRIRRRPPTRPPLHYVGPFEF
QVENEGNTPCNILEEIIWYKDKEVLQMKERTPLSALKKAISSAPPTRDFLGALRRSYSRT
GLPGLIAEVKKASPSRGLLREDFNPVKIAKAYEKGGAACLSVLTDEKYFQGSFENLEAIR
NAGVECPLLCKEFVVDAWQIYYARIKGADAILLIAAVLPDIDIMYMTKICKLLGLTALVE
VHDEREMDRVLGIDGIELIGINNRDLGTFKVDISNTKNLLEGERGKRIHEEGIIVVGESG
LFTPADVAYVQEAGVKAVLVGESLVKQMDPAKGISELFGKDIS

Transcript Sequence

Gene sequence data has not been registered.